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RNAcentral: A comprehensive database of non-coding RNA sequences

dc.creatorPetrov A.I., Kay S.J.E., Kalvari I., Howe K.L., Gray K.A., Bruford E.A., Kersey P.J., Cochrane G., Finn R.D., Bateman A., Kozomara A., Griffiths-Jones S., Frankish A., Zwieb C.W., Lau B.Y., Williams K.P., Chan P.P., Lowe T.M., Cannone J.J., Gutell R.R., Machnicka M.A., Bujnicki J.M., Yoshihama M., Kenmochi N., Chai B., Cole J.R., Szymanski M., Karlowski W.M., Wood V., Huala E., Berardini T.Z., Zhao Y., Chen R., Zhu W., Paraskevopoulou M.D., Vlachos I.S., Hatzigeorgiou A.G., Ma L., Zhang Z., Puetz J., Stadler P.F., McDonald D., Basu S., Fey P., Engel S.R., Cherry J.M., Volders P.-J., Mestdagh P., Wower J., Clark M., Quek X.C., Dinger M.E., The RNAcentral Consortiumen
dc.date.accessioned2023-01-31T09:50:02Z
dc.date.available2023-01-31T09:50:02Z
dc.date.issued2017
dc.identifier10.1093/nar/gkw1008
dc.identifier.issn03051048
dc.identifier.urihttp://hdl.handle.net/11615/78190
dc.description.abstractRNAcentral is a database of non-coding RNA (ncRNA) sequences that aggregates data from specialised ncRNA resources and provides a single entry point for accessing ncRNA sequences of all ncRNA types from all organisms. Since its launch in 2014, RNAcentral has integrated twelve new resources, taking the total number of collaborating database to 22, and began importing new types of data, such as modified nucleotides from MODOMICS and PDB. We created new species-specific identifiers that refer to unique RNA sequences within a context of single species. The website has been subject to continuous improvements focusing on text and sequence similarity searches as well as genome browsing functionality. All RNAcentral data is provided for free and is available for browsing, bulk downloads, and programmatic access at http://rnacentral.org/. © The Author(s) 2016.en
dc.language.isoenen
dc.sourceNucleic Acids Researchen
dc.source.urihttps://www.scopus.com/inward/record.uri?eid=2-s2.0-85016042529&doi=10.1093%2fnar%2fgkw1008&partnerID=40&md5=0cc98dfcf601cad203da12e6514c97d1
dc.subjectuntranslated RNAen
dc.subjectnucleotideen
dc.subjectuntranslated RNAen
dc.subjectArticleen
dc.subjectcontrolled studyen
dc.subjectdata analysisen
dc.subjectdata baseen
dc.subjectgene libraryen
dc.subjectgenetic similarityen
dc.subjectMODOMICS databaseen
dc.subjectnucleic acid databaseen
dc.subjectnucleotide motifen
dc.subjectnucleotide sequenceen
dc.subjectRNA sequenceen
dc.subjectRNA transcriptionen
dc.subjectRNAcentral databaseen
dc.subjectsequence homologyen
dc.subjectsoftwareen
dc.subjectspecies identificationen
dc.subjectweb browseren
dc.subjectanimalen
dc.subjectchemistryen
dc.subjectgenomicsen
dc.subjecthumanen
dc.subjectsequence analysisen
dc.subjectspecies differenceen
dc.subjectAnimalsen
dc.subjectDatabases, Nucleic Aciden
dc.subjectGenomicsen
dc.subjectHumansen
dc.subjectNucleotidesen
dc.subjectRNA, Untranslateden
dc.subjectSequence Analysis, RNAen
dc.subjectSpecies Specificityen
dc.subjectOxford University Pressen
dc.titleRNAcentral: A comprehensive database of non-coding RNA sequencesen
dc.typejournalArticleen


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