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Phylogenetic correlation of Greek and Italian orf virus isolates based on VIR gene

dc.creatorKottaridi, C.en
dc.creatorNomikou, K.en
dc.creatorTeodori, L.en
dc.creatorSavini, G.en
dc.creatorLelli, R.en
dc.creatorMarkoulatos, P.en
dc.creatorMangana, O.en
dc.date.accessioned2015-11-23T10:35:59Z
dc.date.available2015-11-23T10:35:59Z
dc.date.issued2006
dc.identifier10.1016/j.vetmic.2006.04.020
dc.identifier.issn3781135
dc.identifier.urihttp://hdl.handle.net/11615/29739
dc.description.abstractThirteen orf virus isolates obtained during the time period between 1995 and 2004 from crusted scab lesions of nine sheep and four goats from different geographical areas of Greece and Italy with suspected contagious ecthyma infection were analyzed. DNA of all isolates was successfully amplified by PCR with the primers 045F-045R and identified them as parapox virus. Partial DNA sequence of orf virus interferon resistant (VIR) gene, phylogenetic analysis of the available isolates and amino acid comparison of the interferon resistance protein encoded by this genomic region was carried out. According to the results of the present report a precise characterisation of the genomic region studied might provide evidence for the genetic variation and movement of the circulating orf virus strains. © 2006 Elsevier B.V. All rights reserved.en
dc.sourceVeterinary Microbiologyen
dc.source.urihttp://www.scopus.com/inward/record.url?eid=2-s2.0-33747157410&partnerID=40&md5=d2b515b149ac822a731302b13fec43ad
dc.subjectOrf virusen
dc.subjectPhylogenetic analysisen
dc.subjectVirus interferon resistance gene (VIR)en
dc.subjectamino aciden
dc.subjectvirus DNAen
dc.subjectanimal cellen
dc.subjectarticleen
dc.subjectcontrolled studyen
dc.subjectcorrelation analysisen
dc.subjectDNA sequenceen
dc.subjectecthymaen
dc.subjectgene amplificationen
dc.subjectgenetic analysisen
dc.subjectgenetic variabilityen
dc.subjectgeographyen
dc.subjectgoaten
dc.subjectGreeceen
dc.subjectItalyen
dc.subjectnonhumanen
dc.subjectnucleotide sequenceen
dc.subjectphylogenyen
dc.subjectpolymerase chain reactionen
dc.subjectPoxvirusen
dc.subjectpromoter regionen
dc.subjectsheepen
dc.subjecttime series analysisen
dc.subjectvirus geneen
dc.subjectvirus genomeen
dc.subjectvirus identificationen
dc.subjectvirus interferon resistant geneen
dc.subjectvirus isolationen
dc.subjectvirus strainen
dc.subjectAmino Acid Sequenceen
dc.subjectAnimalsen
dc.subjectDNA, Viralen
dc.subjectEcthyma, Contagiousen
dc.subjectGoat Diseasesen
dc.subjectGoatsen
dc.subjectMolecular Sequence Dataen
dc.subjectSequence Alignmenten
dc.subjectSpecies Specificityen
dc.subjectCapra hircusen
dc.subjectOvis ariesen
dc.subjectParapoxvirusen
dc.titlePhylogenetic correlation of Greek and Italian orf virus isolates based on VIR geneen
dc.typejournalArticleen


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