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Evolution and taxonomic distribution of nonribosomal peptide and polyketide synthases

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Auteur
Amoutzias, G. D.; Van De Peer, Y.; Mossialos, D.
Date
2008
DOI
10.2217/17460913.3.3.361
Sujet
antibiotics
bioinformatics
distribution
evolution
nonribosomal
peptide synthase
NRPS
PKS
polyketide synthase
prediction
siderophores
ADENYLATION DOMAINS
PHYLOGENETIC ANALYSIS
MULTIDOMAIN PROTEINS
CONDENSATION DOMAINS
SEQUENCE ALIGNMENTS
MEDIATING DOMAINS
GENE-CLUSTER
SYNTHETASES
BIOSYNTHESIS
SPECIFICITY
Microbiology
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Résumé
The majority of nonribosomal peptide synthases and type I polyketide synthases are multimodular megasynthases of oligopeptide and polyketide secondary metabolites, respectively. Owing to their multimodular architecture, they synthesize their metabolites in assembly line logic. The ongoing genomic revolution together with the application of computational tools has provided the opportunity to mine the various genomes for these enzymes and identify those organisms that produce many oligopeptide and polyketide metabolites. In addition, scientists have started to comprehend the molecular mechanisms of megasynthase evolution, by duplication, recombination, point mutation and module skipping. This knowledge and computational analyses have been implemented towards predicting the specificity of these megasynthases and the structure of their end products. It is an exciting field, both for gaining deeper insight into their basic molecular mechanisms and exploiting them biotechnologically.
URI
http://hdl.handle.net/11615/25503
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