Auflistung Nach Schlagwort "Databases, Protein"

The complex evolutionary history of aminoacyl-tRNA synthetases

Chaliotis A., Vlastaridis P., Mossialos D., Ibba M., Becker H.D., Stathopoulos C., Amoutzias G.D. (2017)

Aminoacyl-tRNA synthetases (AARSs) are a superfamily of enzymes responsible for the faithful translation of the genetic code and have lately become a prominent target for synthetic biologists. Our largescale analysis of > ...

Identification of Brucella spp. isolates and discrimination from the vaccine strain Rev.1 by MALDI-TOF mass spectrometry

Christoforidou S., Kyritsi M., Boukouvala E., Ekateriniadou L., Zdragas A., Samouris G., Hadjichristodoulou C. (2020)

Brucellosis' surveillance and control programs require robust laboratory techniques that can reliably identify and biotype Brucella strains and discriminate between vaccine and field infection. In the recent years, Matrix ...

Mining the Protein Data Bank to improve prediction of changes in protein-protein binding

Flores S.C., Alexiou A., Glaros A. (2021)

Predicting the effect of mutations on protein-protein interactions is important for relating structure to function, as well as for in silico affinity maturation. The effect of mutations on protein-protein binding energy ...

Predicting alpha helical transmembrane proteins using HMMs

Tsaousis G.N., Theodoropoulou M.C., Hamodrakas S.J., Bagos P.G. (2017)

Alpha helical transmembrane (TM) proteins constitute an important structural class of membrane proteins involved in a wide variety of cellular functions. The prediction of their transmembrane topology, as well as their ...

Predicting beta barrel transmembrane proteins using HMMs

Tsaousis G.N., Hamodrakas S.J., Bagos P.G. (2017)

Transmembrane beta-barrels (TMBBs) constitute an important structural class of membrane proteins located in the outer membrane of gram-negative bacteria, and in the outer membrane of chloroplasts and mitochondria. They are ...